Gene expression and analysis
The
diversity and genetic relatedness of mango genotypes
from north-eastern region of India were analyzed using
selected eight microsatellite markers. Ninety SSR
markers from whole genome sequence data, were tested
employing 64 mango genotypes and four Mangifera species,
for determination of polymorphism and cross species
amplification. We identified 2103 alleles, and allele
number per locus ranged from 15 to 36. The majority of
these markers amplified DNA in the related species and
transferability was 94.4 to 98.8 per cent. The present
study has increased sequence coverage of the mango
genome and the number of mango specific SSR markers.
This is also the first report of the development of
genomic SSR markers in mango using next generation
sequencing technology. The genomic SSR markers
identified in this study will be useful in diversity,
identification, mapping and breeding studies
Chracterisation of indegenous mango varieties.
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